BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031G04LP1|AL429450
(965 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1847 0.0
>3x_Contig1806
Length = 53694
Score = 1847 bits (929), Expect = 0.0
Identities = 955/965 (98%), Gaps = 1/965 (0%)
Strand = Plus / Minus
Query: 1 gatcttcatcttcaacttgcttgtcccagtagtaagacacagagtatgggtggacatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12695 gatcttcatcttcaacttgcttgtcccagtagtaagacacagagtatgggtggacatctt 12636
Query: 61 caaatttaaatggacgaactctcatggttggagagtggatagcacagacaaaagcagcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12635 caaatttaaatggacgaactctcatggttggagagtggatagcacagacaaaagcagcac 12576
Query: 121 ccttagcaatagcttcatcttgattcaaagtagtagacaatggcttgttgaatgccttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12575 ccttagcaatagcttcatcttgattcaaagtagtagacaatggcttgttgaatgccttag 12516
Query: 181 agatagcatccttcaaacaaggaatacgagtggtaccaccgatgatttcaacgaagtcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12515 agatagcatccttcaaacaaggaatacgagtggtaccaccgatgatttcaacgaagtcaa 12456
Query: 241 catcttcagcagtcaagttggcttgtttcaatgccttggttactggatcagtgacacgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12455 catcttcagcagtcaagttggcttgtttcaatgccttggttactggatcagtgacacgtt 12396
Query: 301 ccaacaaagaagaaaccaattcttccaattcttctctggacaattgagaggaaacatcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12395 ccaacaaagaagaaaccaattcttccaattcttctctggacaattgagaggaaacatcga 12336
Query: 361 cgtcgttcatcacagattcgatgtttaatggggcagcggtgttggcagacaagaccttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12335 cgtcgttcatcacagattcgatgtttaatggggcagcggtgttggcagacaagaccttct 12276
Query: 421 tcaacttttcagcagcactcaagactctgttgtaagccttggcattttctctgatatcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12275 tcaacttttcagcagcactcaagactctgttgtaagccttggcattttctctgatatcga 12216
Query: 481 ttttgtacttacccttgaattcatcggcaaagtgttcagtgatggcatgatcgaagtctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12215 ttttgtacttacccttgaattcatcggcaaagtgttcagtgatggcatgatcgaagtctc 12156
Query: 541 taccaccaaagtgcttatcataagcagtacccaagaccttcaattcacctttcttgaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12155 taccaccaaagtgcttatcataagcagtacccaagaccttcaattcacctttcttgaaag 12096
Query: 601 caccaatggagcaggtataagaagagtgaccaatatcaacaaaggcaacaattcttggct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12095 caccaatggagcaggtataagaagagtgaccaatatcaacaaaggcaacaattcttggct 12036
Query: 661 tttcttcaccttctggtaaatcggtcttgaaaacaccgtaagagacagcagcagcagtta 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 12035 tttcttcaccttctggtaaatcggtcttgaaaacaccgtaagagacagcagcagcagtaa 11976
Query: 721 tgtcgttgacgattctaactgggttcaaaccagcaattctggcagcatcagcgatacaty 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11975 tgtcgttgacgattctaactgggttcaaaccagcaattctggcagcatcagcgatagcat 11916
Query: 781 acttttgttcttcagtgtaccaggttggaacagcgatasaaacatcggtgatgttaccct 840
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 11915 acttttgttcttcagtgtaccaggttggaacagcgatagcaacatcggtgatgttaccct 11856
Query: 841 tggtctcttcaataacggtggacttgaccttgttaatgaacattgccaccacttgagtkg 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11855 tggtctcttcaataacggtggacttgaccttgttaatgaacattgccaccacttgagtgg 11796
Query: 901 cagaatagacttgttgttcaccaccaaatctggacctgggkaccaatcttaccatcatcc 960
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 11795 cagaatagacttgttgttcaccaccaaatct-gacctgggtaccaatcttaccatcatcc 11737
Query: 961 agctt 965
|||||
Sbjct: 11736 agctt 11732
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8608
Number of Sequences: 1807
Number of extensions: 8608
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 965
length of database: 10,358,551
effective HSP length: 16
effective length of query: 949
effective length of database: 10,329,639
effective search space: 9802827411
effective search space used: 9802827411
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)